The mongodb adapter `updateOne` method accepts an `options` argument
that allows query options to be passed to mongoose. This parameter was
added in https://github.com/payloadcms/payload/pull/8397 to support the
`upsert` operation.
This `options` parameter can also be useful when using the database
adaptor directly without going through the local api. It is true that
the Mongoose models could be used directly in such situations, but the
adapter methods include a lot of useful functionality, like for instance
the sanitization of document and relationship ids, so it is desirable to
be able to use the adapter functions while still being able to provide
mongoose query options (e.g. `{timestamps: false}`).
This PR adds the same options parameter to the other update methods of
the mongodb adapter.
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